InpaintSegmentation: Module to inpaint segmentations into OCT volumes¶
PRLEC Framework for OCT Processing and Visualization
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OCT_GUI.Algorithms.AutomaticSegmentation.InpaintSegmentation.
inpaint
(_slice, shortest_path, y_offset, mode, dictParameters)[source]¶ Inpaint RPE into volume. Value 64/127 is used to mark the RPE/ILM.
Parameters: - slice: numpy array 2D
volume slice for getting shape
- shortest_path: numpy array 1D
shortest path calculated by dijkstra’s algorithm
- y_offset: scalar
current y_offset - denoting the skipped rows for runtime optimization
- mode: string
‘RPE’ or ‘ILM’
- dictParameters: dictionary
Parameters from parameters.txt (here: RPE_VALUE and BM_VALUE)